Domain ID e4erpD2

Download files:
  • A: a/b barrels
  • X: Ten stranded beta/alpha barrel
  • H: Ten stranded beta/alpha barrel
  • T: Ten stranded beta/alpha barrel
  • F: Ribonuc_red_lgC
UID: 000979580
Type: Automatic domain
Parent: e1rlrA2
Range: D:215-733
PDB: 4erp
PDB Description: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA
UniProt: P00452
Hsap BLAST neighbor: P23921
Species:

Structure of domain e4erpD2

Domains in the same chain:

e4erpD3 D:3-99 RuvA-C ATP cone ATP cone
e4erpD4 D:100-221 Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases
e4erpD2 D:215-733 Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel

Domains in the same PDB:

e4erpA1 A:4-99 RuvA-C ATP cone ATP cone
e4erpA3 A:100-221 Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases
e4erpA2 A:215-733 Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel
e4erpB3 B:4-99 RuvA-C ATP cone ATP cone
e4erpB1 B:100-221 Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases
e4erpB2 B:215-733 Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel
e4erpC1 C:4-99 RuvA-C ATP cone ATP cone
e4erpC3 C:100-221 Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases
e4erpC2 C:215-733 Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel
e4erpD3 D:3-99 RuvA-C ATP cone ATP cone
e4erpD4 D:100-221 Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases Alpha helical domain of ribonucleotide reductases
e4erpD2 D:215-733 Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel Ten stranded beta/alpha barrel
e4erpE1 E:1-352 Ferritin/Heme oxygenase/4-helical cytokines Ferritin/Heme oxygenase Heme oxygenase/Ribonucleotide reductase
e4erpF1 F:1-352 Ferritin/Heme oxygenase/4-helical cytokines Ferritin/Heme oxygenase Heme oxygenase/Ribonucleotide reductase
e4erpG1 G:1-352 Ferritin/Heme oxygenase/4-helical cytokines Ferritin/Heme oxygenase Heme oxygenase/Ribonucleotide reductase
e4erpH1 H:1-352 Ferritin/Heme oxygenase/4-helical cytokines Ferritin/Heme oxygenase Heme oxygenase/Ribonucleotide reductase

Structural contacts of domain e4erpD2 of H-group "Ten stranded beta/alpha barrel":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4erpC2 D:x,y,z->C:X,Y,Z Ten stranded beta/alpha barrel Interaction Interface Pymol
e4erpA2 D:x,y,z->A:X-1/2,-Y-1/2,-Z Ten stranded beta/alpha barrel Interaction Interface Pymol
e4erpA1 D:x,y,z->A:X,Y,Z ATP cone Interaction Interface Pymol
e4erpF1 D:X,Y,Z->F:x,y,z Ferritin/Heme oxygenase Interaction Interface Pymol