ECOD: domain e4ex5A4

Domain ID e4ex5A4

A: a+b three layers
X: Class II aaRS and biotin synthetases
H: Class II aaRS and biotin synthetases
T: Class II aaRS and biotin synthetases
F: tRNA-synt_2

UID:	001244201
Type:	Automatic domain
Parent:	e1e1oA2
Range:	A:154-506
Ligands:	LYS
PDB:	4ex5
PDB Description:	Lysine--tRNA ligase
UniProt:	Q2SXD6
Hsap BLAST neighbor:	Q15046
Species:

Domain
In chain context
In PDB context

Structure of domain e4ex5A4

Domains in the same chain:

Download Pymol

e4ex5A3	A:15-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4ex5A4	A:154-506	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Domains in the same PDB:

e4ex5A3	A:15-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4ex5A4	A:154-506	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4ex5B5	B:14-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4ex5B6	B:154-506	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Structural contacts of domain e4ex5A4 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ex5B5	A:X,Y,Z->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e4ex5B6	A:X,Y,Z->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4ex5B5	A:x,y,z->B:-X,Y-1/2,-Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e4ex5A3	A:-X-1,Y-1/2,-Z->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e4ex5B6	A:x,y,z->B:X,Y,Z-1	Class II aaRS and biotin synthetases	Interaction Interface Pymol