ECOD: domain e4f2dA1

Domain ID e4f2dA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: Arabinose_Isome,Arabinose_Iso_C

UID:	000150418
Type:	Automatic domain
Parent:	e2ajtA1
Range:	A:329-498
Ligands:	ACY MN RB0
PDB:	4f2d
PDB Description:	L-arabinose isomerase
UniProt:	P08202
Species:

Domain
In chain context
In PDB context

Structure of domain e4f2dA1

Domains in the same chain:

Download Pymol

e4f2dA2	A:1-175	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dA3	A:176-328	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dA1	A:329-498	cradle loop barrel	RIFT-related	Alanine racemase-C

Domains in the same PDB:

e4f2dA2	A:1-175	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dA3	A:176-328	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dA1	A:329-498	cradle loop barrel	RIFT-related	Alanine racemase-C
e4f2dB2	B:1-175	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dB3	B:176-328	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dB1	B:329-498	cradle loop barrel	RIFT-related	Alanine racemase-C
e4f2dC2	C:1-175	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dC3	C:176-328	Flavodoxin-like	Class I glutamine amidotransferase-like	L-fucose isomerase, N-terminal and second domains
e4f2dC1	C:329-498	cradle loop barrel	RIFT-related	Alanine racemase-C

Structural contacts of domain e4f2dA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4f2dB2	A:X,Y,Z->B:x,y,z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e4f2dB1	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4f2dC1	A:X,Y,Z->C:x,y,z	RIFT-related	Interaction Interface Pymol
e4f2dB1	A:X-Y,-Y,-Z+1/3->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4f2dC2	A:x,y,z->C:-Y,X-Y-1,Z-1/3	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e4f2dA2	A:x,y,z->A:Y,X-1,-Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol