Domain ID e4f2mE1

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  • A: a+b three layers
  • X: Coronavirus spike protein receptor-binding domain
  • H: Coronavirus spike protein receptor-binding domain
  • T: Alpha-coronavirus spike protein receptor-binding domain
  • F: CoV_S1
UID: 000151991
Type: Automatic domain
Parent: e3kbhE1
Range: E:507-654
Ligands: NAG
PDB: 4f2m
PDB Description: SPIKE PROTEIN
UniProt: Q0PKZ5
Species:

Structure of domain e4f2mE1

Domains in the same chain:

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e4f2mE1 E:507-654 Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain Alpha-coronavirus spike protein receptor-binding domain

Domains in the same PDB:

e4f2mA1 A:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mA2 A:123-220 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mB1 B:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mB2 B:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mC1 C:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mC2 C:123-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mD1 D:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mD2 D:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4f2mE1 E:507-654 Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain Alpha-coronavirus spike protein receptor-binding domain
e4f2mF1 F:507-654 Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain Alpha-coronavirus spike protein receptor-binding domain

Structural contacts of domain e4f2mE1 of H-group "Coronavirus spike protein receptor-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4f2mF1 E:X,Y,Z->F:x,y,z Coronavirus spike protein receptor-binding domain Interaction Interface Pymol
e4f2mA1 E:X,Y,Z->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4f2mB1 E:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4f2mA2 E:x,y,z->A:-X-2,Y-1/2,-Z+2 Immunoglobulin-related Interaction Interface Pymol