ECOD: domain e4f3lB5

Domain ID e4f3lB5

A: a+b three layers
X: Profilin-like
H: sensor domains
T: sensor domains
F: PAS

UID:	001191726
Type:	Automatic domain
Parent:	e1nwzA1
Range:	B:156-211,B:238-254,B:276-290,B:310-333
PDB:	4f3l
PDB Description:	BMAL1b
UniProt:	Q9WTL8
Hsap BLAST neighbor:	O00327
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e4f3lB5

Domains in the same chain:

Download Pymol

e4f3lB4	B:71-128	HLH-like	HLH, helix-loop-helix DNA-binding domain	HLH, helix-loop-helix DNA-binding domain
e4f3lB5	B:156-211,B:238-254,B:276-290,B:310-333	Profilin-like	sensor domains	sensor domains
e4f3lB3	B:334-442	Profilin-like	sensor domains	sensor domains

Domains in the same PDB:

e4f3lA1	A:31-97	HLH-like	HLH, helix-loop-helix DNA-binding domain	HLH, helix-loop-helix DNA-binding domain
e4f3lA3	A:98-223	Profilin-like	sensor domains	sensor domains
e4f3lA2	A:248-384	Profilin-like	sensor domains	sensor domains
e4f3lB4	B:71-128	HLH-like	HLH, helix-loop-helix DNA-binding domain	HLH, helix-loop-helix DNA-binding domain
e4f3lB5	B:156-211,B:238-254,B:276-290,B:310-333	Profilin-like	sensor domains	sensor domains
e4f3lB3	B:334-442	Profilin-like	sensor domains	sensor domains

Structural contacts of domain e4f3lB5 of H-group "sensor domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4f3lA2	B:X,Y,Z->A:x,y,z	sensor domains	Interaction Interface Pymol
e4f3lA3	B:X,Y,Z->A:x,y,z	sensor domains	Interaction Interface Pymol
e4f3lA2	B:x,y,z->A:X,Y-1,Z	sensor domains	Interaction Interface Pymol
e4f3lB5	B:x,y,z->B:X-1,Y,Z	sensor domains	Interaction Interface Pymol
e4f3lB5	B:X-1,Y,Z->B:x,y,z	sensor domains	Interaction Interface Pymol
e4f3lA2	B:x,y,z->A:X-1/2,-Y+1/2,-Z+2	sensor domains	Interaction Interface Pymol