Domain ID e4f4wB5

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: IMS
UID: 001256255
Type: Automatic domain
Parent: e1t3nA4
Range: B:1-21,B:77-178
Ligands: CA DCP
PDB: 4f4w
PDB Description: DNA polymerase IV
UniProt: Q4JB80
Hsap BLAST neighbor: Q9UBZ9
Species:

Structure of domain e4f4wB5

Domains in the same chain:

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e4f4wB5 B:1-21,B:77-178 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4wB8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4wB7 B:179-241 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4wB6 B:242-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4f4wA5 A:1-21,A:77-178 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4wA8 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4wA7 A:179-241 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4wA6 A:242-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e4f4wB5 B:1-21,B:77-178 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4wB8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4wB7 B:179-241 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4wB6 B:242-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4f4wB5 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4f4wA7 B:X-1,Y,Z-1->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e4f4wA5 B:-X,Y-1/2,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol