Domain ID e4f4yB5

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: IMS
UID: 001256211
Type: Automatic domain
Parent: e1t3nA4
Range: B:1-21,B:77-178
Ligands: CA DCP
PDB: 4f4y
PDB Description: DNA polymerase IV
UniProt: Q4JB80
Hsap BLAST neighbor: Q9UBZ9
Species:

Structure of domain e4f4yB5

Domains in the same chain:

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e4f4yB5 B:1-21,B:77-178 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4yB7 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4yB6 B:179-241 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4yB2 B:242-343 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4f4yA5 A:1-21,A:77-178 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4yA7 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4yA6 A:179-241 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4yA2 A:242-343 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e4f4yB5 B:1-21,B:77-178 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4yB7 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4yB6 B:179-241 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4yB2 B:242-343 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4f4yB5 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4f4yA5 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol