Domain ID e4f4zB6

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 001256260
Type: Automatic domain
Parent: e1jx4A2
Range: B:241-341
PDB: 4f4z
PDB Description: DNA polymerase IV
UniProt: Q4JB80
Species:

Structure of domain e4f4zB6

Domains in the same chain:

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e4f4zB5 B:1-21,B:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4zB8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4zB7 B:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4zB6 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4f4zA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4zA8 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4zA7 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4zA6 A:241-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e4f4zB5 B:1-21,B:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f4zB8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4f4zB7 B:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4f4zB6 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4f4zB6 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4f4zA5 B:X-1,Y+1,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4f4zA8 B:X-1,Y+1,Z->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol