| UID: | 001161846 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3dplR1 |
| Range: | D:20-104 |
| Ligands: | ZN |
| PDB: | 4f52 |
| PDB Description: | E3 ubiquitin-protein ligase RBX1 |
| UniProt: | P62877 |
| Hsap BLAST neighbor: | P62877 |
| Species: | Homo sapiens |
Structure of domain e4f52D2
Domains in the same chain:
| e4f52D2 | D:20-104 | RING/U-box-like | RING/U-box-like | RING/U-box |
Domains in the same PDB:
| e4f52A3 | A:420-505 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e4f52A1 | A:506-603 | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins |
| e4f52A2 | A:603-689 | HTH | HTH | winged |
| e4f52B1 | B:19-106 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e4f52C7 | C:419-505 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e4f52C6 | C:506-603 | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins | a+b domain in cullin-like proteins |
| e4f52C8 | C:604-688 | HTH | HTH | winged |
| e4f52D2 | D:20-104 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e4f52E1 | E:1-583 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e4f52F1 | F:1-258,F:280-583 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
Structural contacts of domain e4f52D2 of H-group "RING/U-box-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4f52C6 | D:x,y,z->C:X,Y,Z | a+b domain in cullin-like proteins | Interaction Interface Pymol |
| e4f52C8 | D:x,y,z->C:X,Y,Z | HTH | Interaction Interface Pymol |
| e4f52F1 | D:X,Y,Z->F:x,y,z | ARM repeat | Interaction Interface Pymol |
| e4f52E1 | D:X-1,Y,Z-1->E:x,y,z | ARM repeat | Interaction Interface Pymol |
| e4f52F1 | D:X-1,Y,Z->F:x,y,z | ARM repeat | Interaction Interface Pymol |
