Domain ID e4f5xO2

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  • A: alpha bundles
  • X: A virus capsid protein alpha-helical domain
  • H: A virus capsid protein alpha-helical domain
  • T: A virus capsid protein alpha-helical domain
  • F: Rota_Capsid_VP6
UID: 000974920
Type: Automatic domain
Parent: e1qhdA2
Range: O:1-148,O:333-397
PDB: 4f5x
PDB Description: INTERMEDIATE CAPSID PROTEIN VP6
UniProt: A7J3A1
Species:

Structure of domain e4f5xO2

Domains in the same chain:

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e4f5xO2 O:1-148,O:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xO1 O:149-332 jelly-roll Viral protein domain Viral protein domain

Domains in the same PDB:

e4f5xA1 A:100-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e4f5xB1 B:71-880 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e4f5xC2 C:1-148,C:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xC1 C:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xD2 D:1-148,D:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xD1 D:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xE2 E:1-148,E:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xE1 E:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xF2 F:1-148,F:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xF1 F:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xG2 G:1-148,G:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xG1 G:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xH2 H:1-148,H:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xH1 H:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xI2 I:1-148,I:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xI1 I:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xJ2 J:1-148,J:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xJ1 J:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xK2 K:1-148,K:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xK1 K:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xL2 L:1-148,L:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xL1 L:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xM2 M:1-148,M:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xM1 M:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xN2 N:1-148,N:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xN1 N:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xO2 O:1-148,O:333-397 A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain
e4f5xO1 O:149-332 jelly-roll Viral protein domain Viral protein domain
e4f5xW3 W:2-257,W:280-338 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3
e4f5xW1 W:339-672 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4f5xW4 W:673-771 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4f5xW2 W:772-1086 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3

Structural contacts of domain e4f5xO2 of H-group "A virus capsid protein alpha-helical domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4f5xB1 O:x,y,z->B:X,Y,Z Inner layer core protein p3-related Interaction Interface Pymol
e4f5xN2 O:x,y,z->N:X,Y,Z A virus capsid protein alpha-helical domain Interaction Interface Pymol
e4f5xM2 O:x,y,z->M:X,Y,Z A virus capsid protein alpha-helical domain Interaction Interface Pymol