Domain ID e4fbuB6

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 001178215
Type: Automatic domain
Parent: e1jx4A2
Range: B:241-341
PDB: 4fbu
PDB Description: DNA polymerase IV
UniProt: Q97W02
Species:

Structure of domain e4fbuB6

Domains in the same chain:

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e4fbuB5 B:1-21,B:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4fbuB8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4fbuB7 B:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4fbuB6 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4fbuA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4fbuA8 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4fbuA7 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4fbuA6 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e4fbuB5 B:1-21,B:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4fbuB8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4fbuB7 B:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4fbuB6 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4fbuB6 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fbuA5 B:X,Y,Z-1->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4fbuA8 B:X,Y,Z-1->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol
e4fbuA6 B:X-1,Y,Z-1->A:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol