Domain ID e4fmcD1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Ras
UID: 000970629
Type: Automatic domain
Parent: e1mh1A1
Range: D:6-166
Ligands: AF3 GDP MG PGE
PDB: 4fmc
PDB Description: Ras-related protein Rab-1A
UniProt: P62820
Hsap BLAST neighbor: P62820
Species: Homo sapiens

Structure of domain e4fmcD1

Domains in the same chain:

e4fmcD1 D:6-166 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4fmcA1 A:47-145 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmcA2 A:146-397 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related
e4fmcB1 B:6-166 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fmcC1 C:48-145 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmcC2 C:146-397 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related
e4fmcD1 D:6-166 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4fmcE1 E:47-145 LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related LEE-encoded effector EspG N-terminal domain-related
e4fmcE2 E:146-396 LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related LEE-encoded effector EspG C-terminal domain-related
e4fmcF1 F:14-130 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4fmcD1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fmcC2 D:x,y,z->C:X,Y,Z LEE-encoded effector EspG C-terminal domain-related Interaction Interface Pymol
e4fmcE1 D:x,y,z->E:X,Y,Z LEE-encoded effector EspG N-terminal domain-related Interaction Interface Pymol
e4fmcB1 D:x,y,z->B:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4fmcA2 D:x,y,z->A:X,Y,Z LEE-encoded effector EspG C-terminal domain-related Interaction Interface Pymol
e4fmcD1 D:x,y,z->D:-X,-Y,Z P-loop domains-related Interaction Interface Pymol
e4fmcD1 D:-X,-Y,Z->D:x,y,z P-loop domains-related Interaction Interface Pymol