| UID: | 000153537 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1akoA1 |
| Range: | A:120-369 |
| Ligands: | GOL MG NA |
| PDB: | 4fpv |
| PDB Description: | Tyrosyl-DNA phosphodiesterase 2 |
| UniProt: | Q5XJA0 |
| Hsap BLAST neighbor: | O95551 |
| Species: | Danio rerio |
Structure of domain e4fpvA1
Domains in the same chain:
| e4fpvA1 | A:120-369 | Carbon-nitrogen hydrolase-like | DNase I-like | DNase I-like |
Domains in the same PDB:
| e4fpvA1 | A:120-369 | Carbon-nitrogen hydrolase-like | DNase I-like | DNase I-like |
| e4fpvB2 | B:113-369 | Carbon-nitrogen hydrolase-like | DNase I-like | DNase I-like |
Structural contacts of domain e4fpvA1 of H-group "DNase I-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4fpvB2 | A:x,y,z->B:-X+1/2,-Y,Z-1/2 | DNase I-like | Interaction Interface Pymol |
| e4fpvB2 | A:X,Y,Z->B:x,y,z | DNase I-like | Interaction Interface Pymol |
| e4fpvA1 | A:x,y,z->A:X-1/2,-Y-1/2,-Z | DNase I-like | Interaction Interface Pymol |
| e4fpvA1 | A:X-1/2,-Y-1/2,-Z->A:x,y,z | DNase I-like | Interaction Interface Pymol |
| e4fpvB2 | A:X-1/2,-Y-1/2,-Z->B:x,y,z | DNase I-like | Interaction Interface Pymol |
| e4fpvB2 | A:X-1,Y,Z->B:x,y,z | DNase I-like | Interaction Interface Pymol |
| e4fpvB2 | A:X-1/2,-Y+1/2,-Z->B:x,y,z | DNase I-like | Interaction Interface Pymol |
