Domain ID e4fykC3

Download files:
  • A: a/b three-layered sandwiches
  • X: Flavodoxin-like
  • H: N-deoxyribosyltransferase
  • T: N-deoxyribosyltransferase
  • F: Nuc_deoxyrib_tr
UID: 001222792
Type: Automatic domain
Parent: e1f8yA1
Range: C:10-148
Ligands: SRA
PDB: 4fyk
PDB Description: Deoxyribonucleoside 5'-monophosphate N-glycosidase
UniProt: O35820
Hsap BLAST neighbor: O43598
Species: Rattus norvegicus

Structure of domain e4fykC3

Structural contacts of domain e4fykC3 of H-group "N-deoxyribosyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4fykD3 C:X,Y,Z->D:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol
e4fykB3 C:x,y,z->B:-X+1,-Y+1,Z N-deoxyribosyltransferase Interaction Interface Pymol
e4fykB3 C:-X+1/2,Y-1/2,-Z+1->B:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol
e4fykD3 C:x,y,z->D:X,Y,Z-1 N-deoxyribosyltransferase Interaction Interface Pymol
e4fykB3 C:X-1/2,-Y+1/2,-Z+1->B:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol
e4fykA3 C:-X+1/2,Y-1/2,-Z+1->A:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol