ECOD: domain e4g0vA4

Domain ID e4g0vA4

A: alpha arrays
X: HTH
H: HTH
T: winged
F: DNA_topoisoIV

UID:	001066820
Type:	Automatic domain
Parent:	e1bjtA1
Range:	A:733-861
Ligands:	MG MIX
PDB:	4g0v
PDB Description:	DNA TOPOISOMERASE 2-BETA
UniProt:	Q02880
Hsap BLAST neighbor:	Q02880
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4g0vA4

Domains in the same chain:

Download Pymol

e4g0vA1	A:452-591,A:646-732	HAD domain-like	HAD domain-related	Toprim domain
e4g0vA4	A:733-861	HTH	HTH	winged
e4g0vA5	A:862-1029	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e4g0vA6	A:1030-1111,A:1135-1201	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase

Domains in the same PDB:

e4g0vA1	A:452-591,A:646-732	HAD domain-like	HAD domain-related	Toprim domain
e4g0vA4	A:733-861	HTH	HTH	winged
e4g0vA5	A:862-1029	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e4g0vA6	A:1030-1111,A:1135-1201	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase
e4g0vB16	B:449-590,B:637-690	HAD domain-like	HAD domain-related	Toprim domain
e4g0vB14	B:691-841	HTH	HTH	winged
e4g0vB15	B:842-1007	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e4g0vB13	B:1008-1105,B:1135-1201	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase

Structural contacts of domain e4g0vA4 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4g0vB14	A:X,Y,Z->B:x,y,z	HTH	Interaction Interface Pymol