ECOD: domain e4g25A1

Domain ID e4g25A1

A: a/b three-layered sandwiches
X: HAD domain-like
H: HAD domain-related
T: PIN domain-like
F: PRORP

UID:	001281095
Type:	Automatic domain
Parent:	e4g23A2
Range:	A:357-532
Ligands:	SR
PDB:	4g25
PDB Description:	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN AT2G32230, MITOCHONDRIAL
UniProt:	Q66GI4
Species:	Arabidopsis thaliana

Domain
In chain context
In PDB context

Structure of domain e4g25A1

Domains in the same chain:

Download Pymol

e4g25A3	A:95-317	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4g25A2	A:318-356,A:533-570	Protein-only RNase P Zn-binding domain	Protein-only RNase P Zn-binding domain	Protein-only RNase P Zn-binding domain
e4g25A1	A:357-532	HAD domain-like	HAD domain-related	PIN domain-like

Domains in the same PDB:

e4g25A3	A:95-317	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4g25A2	A:318-356,A:533-570	Protein-only RNase P Zn-binding domain	Protein-only RNase P Zn-binding domain	Protein-only RNase P Zn-binding domain
e4g25A1	A:357-532	HAD domain-like	HAD domain-related	PIN domain-like

Structural contacts of domain e4g25A1 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4g25A1	A:x,y,z->A:X-1/2,-Y+1/2,-Z	HAD domain-related	Interaction Interface Pymol
e4g25A1	A:X-1/2,-Y+1/2,-Z->A:x,y,z	HAD domain-related	Interaction Interface Pymol
e4g25A1	A:x,y,z->A:X-1,Y,Z	HAD domain-related	Interaction Interface Pymol
e4g25A1	A:X-1,Y,Z->A:x,y,z	HAD domain-related	Interaction Interface Pymol
e4g25A3	A:-X,Y-1/2,-Z+1/2->A:x,y,z	ARM repeat	Interaction Interface Pymol