Domain ID e4g8jD1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 001087075
Type: Automatic domain
Parent: e3pnpA1
Range: D:3-253
Ligands: CL EDO NA THM
PDB: 4g8j
PDB Description: URIDINE PHOSPHORYLASE
UniProt: Q9K4U1
Hsap BLAST neighbor: Q16831
Species: Vibrio cholerae

Structure of domain e4g8jD1

Structural contacts of domain e4g8jD1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4g8jC1 D:x,y,z->C:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4g8jE1 D:X,Y,Z->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4g8jA1 D:-X,Y-1/2,-Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4g8jA1 D:x,y,z->A:X-1,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4g8jB1 D:x,y,z->B:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4g8jF1 D:X,Y,Z->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol