Domain ID e4g9iD6

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Acylphosphatase-like
  • T: Acylphosphatase-like
  • F: Acylphosphatase
UID: 001188123
Type: Automatic domain
Parent: e1apsA1
Range: D:1-99
PDB: 4g9i
PDB Description: HYDROGENASE MATURATION PROTEIN HYPF
UniProt: Q5JII4
Species:

Structure of domain e4g9iD6

Domains in the same chain:

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e4g9iD6 D:1-99 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iD7 D:100-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iD5 D:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iD8 D:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iD10 D:392-502 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iD9 D:503-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e4g9iA5 A:1-99 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iA6 A:100-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iA3 A:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iA7 A:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iA9 A:392-498 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iA8 A:499-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iB6 B:1-91 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iB7 B:102-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iB5 B:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iB8 B:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iB14 B:392-498 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iB13 B:499-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iC12 C:5-99 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iC13 C:100-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iC11 C:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iC14 C:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iC16 C:392-498 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iC15 C:499-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iD6 D:1-99 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iD7 D:100-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iD5 D:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iD8 D:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iD10 D:392-502 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iD9 D:503-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iE6 E:1-91 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iE7 E:102-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iE5 E:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iE8 E:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iE10 E:392-501 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iE9 E:502-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iF6 F:1-91 Alpha-beta plaits Acylphosphatase-like Acylphosphatase-like
e4g9iF7 F:102-136 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iF5 F:137-187 Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF Zinc finger domain in hydrogenase maturation protein HypF
e4g9iF8 F:188-391 YrdC/RibB YrdC/RibB YrdC/RibB
e4g9iF10 F:392-498 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4g9iF9 F:499-772 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Structural contacts of domain e4g9iD6 of H-group "Acylphosphatase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4g9iF7 D:-Y+1,-X+1,-Z+1/6->F:x,y,z Zinc finger domain in hydrogenase maturation protein HypF Interaction Interface Pymol
e4g9iF8 D:-Y+1,-X+1,-Z+1/6->F:x,y,z YrdC/RibB Interaction Interface Pymol
e4g9iF5 D:-Y+1,-X+1,-Z+1/6->F:x,y,z Zinc finger domain in hydrogenase maturation protein HypF Interaction Interface Pymol