Domain ID e4ga5B4

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: Unmapped domains
UID: 001504903
Type: Automatic domain
Parent: e1cz5A1
Range: B:1-83
PDB: 4ga5
PDB Description: PUTATIVE THYMIDINE PHOSPHORYLASE
UniProt: Q5JCX3
Species:

Structure of domain e4ga5B4

Domains in the same chain:

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e4ga5B4 B:1-83 cradle loop barrel RIFT-related double psi
e4ga5B2 B:84-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5B1 B:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5B3 B:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Domains in the same PDB:

e4ga5A4 A:1-84 cradle loop barrel RIFT-related double psi
e4ga5A2 A:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5A1 A:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5A3 A:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5B4 B:1-83 cradle loop barrel RIFT-related double psi
e4ga5B2 B:84-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5B1 B:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5B3 B:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5C4 C:1-84 cradle loop barrel RIFT-related double psi
e4ga5C2 C:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5C1 C:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5C3 C:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5D4 D:1-84 cradle loop barrel RIFT-related double psi
e4ga5D2 D:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5D1 D:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5D3 D:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5E4 E:1-84 cradle loop barrel RIFT-related double psi
e4ga5E2 E:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5E1 E:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5E3 E:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5F4 F:1-84 cradle loop barrel RIFT-related double psi
e4ga5F2 F:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5F1 F:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5F3 F:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5G4 G:1-83 cradle loop barrel RIFT-related double psi
e4ga5G2 G:84-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5G1 G:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5G3 G:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga5H4 H:1-83 cradle loop barrel RIFT-related double psi
e4ga5H2 H:84-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga5H1 H:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga5H3 H:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Structural contacts of domain e4ga5B4 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ga5F4 B:X,Y,Z->F:x,y,z RIFT-related Interaction Interface Pymol
e4ga5F3 B:X,Y,Z->F:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e4ga5D4 B:X-1,Y,Z->D:x,y,z RIFT-related Interaction Interface Pymol
e4ga5D1 B:-X+1,Y,-Z->D:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol