Domain ID e4ga6B1

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  • A: a/b three-layered sandwiches
  • X: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • H: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • T: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • F: Glycos_transf_3
UID: 001524849
Type: Automatic domain
Parent: e1brwA3
Range: B:155-408
Ligands: AMP SO4
PDB: 4ga6
PDB Description: PUTATIVE THYMIDINE PHOSPHORYLASE
UniProt: Q5JCX3
Hsap BLAST neighbor: P19971
Species:

Structure of domain e4ga6B1

Domains in the same chain:

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e4ga6B4 B:1-84 cradle loop barrel RIFT-related double psi
e4ga6B2 B:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga6B1 B:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga6B3 B:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Domains in the same PDB:

e4ga6A4 A:1-84 cradle loop barrel RIFT-related double psi
e4ga6A2 A:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga6A1 A:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga6A3 A:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e4ga6B4 B:1-84 cradle loop barrel RIFT-related double psi
e4ga6B2 B:85-154 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e4ga6B1 B:155-408 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e4ga6B3 B:409-493 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Structural contacts of domain e4ga6B1 of H-group "Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ga6A2 B:x,y,z->A:X,Y,Z Nucleoside phosphorylase/phosphoribosyltransferase-N Interaction Interface Pymol
e4ga6A4 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol