Domain ID e4gc7A6

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: IMS_HHH
UID: 001256113
Type: Automatic domain
Parent: e1jx4A1
Range: A:178-240
Ligands: CA
PDB: 4gc7
PDB Description: DNA polymerase IV
UniProt: Q97W02
Species:

Structure of domain e4gc7A6

Domains in the same chain:

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e4gc7A3 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4gc7A4 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4gc7A6 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4gc7A5 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4gc7A3 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4gc7A4 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4gc7A6 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4gc7A5 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e4gc7B5 B:1-21,B:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4gc7B8 B:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4gc7B7 B:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4gc7B6 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4gc7A6 of H-group "SAM/DNA-glycosylase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gc7A4 A:-X+1,Y-1/2,-Z+3->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol
e4gc7A3 A:-X+1,Y-1/2,-Z+3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4gc7A5 A:-X,Y-1/2,-Z+3->A:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e4gc7B5 A:X,Y,Z-1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol