ECOD: domain e4gd5A2

Domain ID e4gd5A2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: PBP_like_2

UID:	001520573
Type:	Automatic domain
Parent:	e1twyA3
Range:	A:34-108,A:237-276
Ligands:	CL PO4
PDB:	4gd5
PDB Description:	PHOSPHATE ABC TRANSPORTER, PHOSPHATE-BINDING PROTEIN
UniProt:	Q0TTH0
Species:

Domains in the same chain:

Download Pymol

e4gd5A2	A:34-108,A:237-276	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gd5A1	A:109-236	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e4gd5A2	A:34-108,A:237-276	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gd5A1	A:109-236	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gd5B1	B:34-108,B:237-276	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gd5B2	B:109-236	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e4gd5A2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4gd5B1	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gd5B2	A:x,y,z->B:-X,Y-1/2,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gd5A1	A:-X,Y-1/2,-Z+2->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gd5B2	A:x,y,z->B:X-1,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gd5B1	A:x,y,z->B:X-1,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gd5A1	A:x,y,z->A:X,Y,Z-1	Periplasmic binding protein-like II	Interaction Interface Pymol