Domain ID e4gfaB1

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  • A: beta barrels
  • X: XRCC4, N-terminal domain-like
  • H: XRCC4, N-terminal domain
  • T: XRCC4, N-terminal domain
  • F: Unmapped domains
UID: 001833251
Type: Automatic domain
Parent: e4gexB1
Range: B:3-71,B:103-134
PDB: 4gfa
PDB Description: Spindle assembly abnormal protein 6
UniProt: O62479
Species: Caenorhabditis elegans

Structure of domain e4gfaB1

Domains in the same chain:

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e4gfaB1 B:3-71,B:103-134 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e4gfaB2 B:72-102 HTH HTH HTH motif inserted in other structures
e4gfaB3 B:134-157 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain

Domains in the same PDB:

e4gfaA1 A:3-71,A:103-134 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e4gfaA3 A:72-102 HTH HTH HTH motif inserted in other structures
e4gfaA2 A:134-157 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e4gfaB1 B:3-71,B:103-134 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e4gfaB2 B:72-102 HTH HTH HTH motif inserted in other structures
e4gfaB3 B:134-157 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e4gfaC3 C:4-71,C:103-134 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e4gfaC2 C:72-102 HTH HTH HTH motif inserted in other structures
e4gfaC1 C:134-156 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e4gfaD3 D:5-71,D:103-134 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e4gfaD1 D:72-102 HTH HTH HTH motif inserted in other structures
e4gfaD2 D:134-156 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain

Structural contacts of domain e4gfaB1 of H-group "XRCC4, N-terminal domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gfaD2 B:X,Y,Z->D:x,y,z XRCC4 C-terminal oligomerization domain Interaction Interface Pymol
e4gfaD3 B:-X+3/2,Y-1/2,-Z+1->D:x,y,z XRCC4, N-terminal domain Interaction Interface Pymol
e4gfaB1 B:x,y,z->B:-X+1,-Y,Z XRCC4, N-terminal domain Interaction Interface Pymol
e4gfaB1 B:-X+1,-Y,Z->B:x,y,z XRCC4, N-terminal domain Interaction Interface Pymol