Domain ID e4gfrA1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_5
UID: 001516165
Type: Automatic domain
Parent: e1vr5A3
Range: A:1-35,A:139-238,A:489-529
Ligands: CBS
PDB: 4gfr
PDB Description: PEPTIDE ABC TRANSPORTER, PERIPLASMIC PEPTIDE-BINDING PROTEIN
UniProt: Q9KUA3
Species:

Structure of domain e4gfrA1

Structural contacts of domain e4gfrA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gfrA2 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Oligo-peptide binding protein (OPPA) insertion domain Interaction Interface Pymol
e4gfrA3 A:-X,Y-1/2,-Z+1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4gfrA3 A:-X-1/2,-Y-1,Z-1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4gfrA3 A:x,y,z->A:X-1/2,-Y-1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e4gfrA2 A:X-1/2,-Y-1/2,-Z->A:x,y,z Oligo-peptide binding protein (OPPA) insertion domain Interaction Interface Pymol
e4gfrA3 A:-X+1/2,-Y-1,Z-1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4gfrA2 A:X-1,Y,Z->A:x,y,z Oligo-peptide binding protein (OPPA) insertion domain Interaction Interface Pymol