Domain ID e4gg6C2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 000990606
Type: Automatic domain
Parent: e1hdmA2
Range: C:-1-79
PDB: 4gg6
PDB Description: HLA class II histocompatibility antigen, DQ alpha 1 chain
UniProt: P01909
Hsap BLAST neighbor: P01909
Species: Homo sapiens

Structure of domain e4gg6C2

Domains in the same chain:

e4gg6C2 C:-1-79 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4gg6C1 C:80-177 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4gg6A2 A:0-80 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4gg6A1 A:81-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6B2 B:3-94 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4gg6B1 B:95-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6C2 C:-1-79 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4gg6C1 C:80-177 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6D3 D:2-94 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4gg6D2 D:95-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6E1 E:3-132 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6E2 E:133-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6F4 F:2-131 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6F3 F:132-256 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6G5 G:3-129 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6G6 G:130-205 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6H4 H:2-131 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gg6H3 H:132-256 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4gg6C2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hdmA2 C:X,Y,Z->D:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e4gg6D2 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4gg6G6 C:-X,Y-1/2,-Z-1/2->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4gg6A1 C:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4gg6F4 C:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4gg6E1 C:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol