Domain ID e4gjyA1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: Cupin_8
UID: 000152442
Type: Automatic domain
Parent: e1h2kA1
Range: A:182-416
Ligands: CO OGA
PDB: 4gjy
PDB Description: JMJC DOMAIN-CONTAINING PROTEIN 5
UniProt: Q8N371
Hsap BLAST neighbor: Q8N371
Species: Homo sapiens

Structure of domain e4gjyA1

Structural contacts of domain e4gjyA1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gjyA1 A:x,y,z->A:-X+2,Y-1/2,-Z+1/2 Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:-X+2,Y-1/2,-Z+1/2->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:x,y,z->A:X-1,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:X-1,Y,Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:x,y,z->A:-X+3/2,-Y+1,Z-1/2 Double-stranded beta-helix Interaction Interface Pymol
e4gjyA1 A:-X+3/2,-Y+1,Z-1/2->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol