Domain ID e4gkaA1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 001307976
Type: Automatic domain
Parent: e3pnpA1
Range: A:3-285
Ligands: GOL PO4
PDB: 4gka
PDB Description: Purine nucleoside phosphorylase
UniProt: P00491
Hsap BLAST neighbor: P00491
Species: Homo sapiens

Structure of domain e4gkaA1

Structural contacts of domain e4gkaA1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gkaC2 A:X,Y,Z->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4gkaB1 A:X,Y,Z->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4gkaF2 A:x,y,z->F:-X,Y-1/2,-Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4gkaF2 A:x,y,z->F:-X+1,Y-1/2,-Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4gkaB1 A:x,y,z->B:X,Y,Z-1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4gkaC2 A:x,y,z->C:X,Y,Z-1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol