Domain ID e4gkoI1

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  • A: a+b complex topology
  • X: C-type lectin-like
  • H: C-type lectin-like
  • T: C-type lectin-like
  • F: Lectin_C
UID: 001064128
Type: Automatic domain
Parent: e1qddA1
Range: I:158-291
Ligands: CA
PDB: 4gko
PDB Description: LOW AFFINITY IMMUNOGLOBULIN EPSILON FC RECEPTOR
UniProt: P06734
Hsap BLAST neighbor: P06734
Species: Homo sapiens

Structure of domain e4gkoI1

Domains in the same chain:

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e4gkoI1 I:158-291 C-type lectin-like C-type lectin-like C-type lectin-like

Domains in the same PDB:

e4gkoA1 A:335-428 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoA2 A:429-545 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoB1 B:336-428 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoB2 B:429-545 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoC2 C:336-438 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoC1 C:439-545 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoD4 D:335-438 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoD3 D:439-541 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoE4 E:335-438 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoE3 E:439-540 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoF6 F:336-438 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoF5 F:439-539 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4gkoG1 G:158-292 C-type lectin-like C-type lectin-like C-type lectin-like
e4gkoH1 H:158-290 C-type lectin-like C-type lectin-like C-type lectin-like
e4gkoI1 I:158-291 C-type lectin-like C-type lectin-like C-type lectin-like
e4gkoJ1 J:158-292 C-type lectin-like C-type lectin-like C-type lectin-like
e4gkoK1 K:157-291 C-type lectin-like C-type lectin-like C-type lectin-like
e4gkoL1 L:158-293 C-type lectin-like C-type lectin-like C-type lectin-like

Structural contacts of domain e4gkoI1 of H-group "C-type lectin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gkoC1 I:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4gkoC2 I:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4gkoL1 I:x,y,z->L:X-1/2,-Y-1/2,-Z C-type lectin-like Interaction Interface Pymol
e4gkoI1 I:x,y,z->I:X-1/2,-Y-1/2,-Z C-type lectin-like Interaction Interface Pymol
e4gkoI1 I:X-1/2,-Y-1/2,-Z->I:x,y,z C-type lectin-like Interaction Interface Pymol
e4gkoE3 I:x,y,z->E:X-1/2,-Y+1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e4gkoD4 I:X-1/2,-Y-1/2,-Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4gkoL1 I:x,y,z->L:X-1,Y,Z C-type lectin-like Interaction Interface Pymol