ECOD: domain e4gl8A2

Domain ID e4gl8A2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_5

UID:	001520610
Type:	Automatic domain
Parent:	e1zlqA4
Range:	A:30-72,A:190-287,A:502-529
PDB:	4gl8
PDB Description:	OLIGOPEPTIDE ABC TRANSPORTER OPPAIV
UniProt:	H7C7K8
Species:

Domain
In chain context
In PDB context

Structure of domain e4gl8A2

Domains in the same chain:

Download Pymol

e4gl8A2	A:30-72,A:190-287,A:502-529	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gl8A3	A:64-177	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e4gl8A1	A:288-501	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e4gl8A2	A:30-72,A:190-287,A:502-529	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gl8A3	A:64-177	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e4gl8A1	A:288-501	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gl8B2	B:30-63,B:185-282,B:484-529	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4gl8B1	B:64-162	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e4gl8B3	B:288-483	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e4gl8A2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4gl8B3	A:X-1/2,-Y+3/2,-Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gl8B2	A:X-1,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gl8B2	A:X-1/2,-Y+1/2,-Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gl8B2	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4gl8A1	A:x,y,z->A:-X+3/2,-Y+1,Z-1/2	Periplasmic binding protein-like II	Interaction Interface Pymol