Domain ID e4gmdA1

Download files:
  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Thymidylate_kin
UID: 000152320
Type: Automatic domain
Parent: e1nn5A1
Range: A:1-209
Ligands: ATM CL GOL
PDB: 4gmd
PDB Description: THYMIDYLATE KINASE
UniProt: Q9HZN8
Hsap BLAST neighbor: P23919
Species:

Structure of domain e4gmdA1

Structural contacts of domain e4gmdA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gmdC2 A:X,Y,Z->C:x,y,z P-loop domains-related Interaction Interface Pymol
e4gmdD2 A:x,y,z->D:-X+1,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e4gmdC2 A:x,y,z->C:-X+1,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e4gmdB2 A:X,Y,Z->B:x,y,z P-loop domains-related Interaction Interface Pymol
e4gmdC2 A:x,y,z->C:X-1,Y,Z P-loop domains-related Interaction Interface Pymol
e4gmdB2 A:x,y,z->B:-X+1,Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e4gmdD2 A:x,y,z->D:-X+1,Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e4gmdD2 A:X,Y,Z->D:x,y,z P-loop domains-related Interaction Interface Pymol
e4gmdB2 A:x,y,z->B:X-1,Y,Z P-loop domains-related Interaction Interface Pymol