ECOD: domain e4gmjE1

Domain ID e4gmjE1

A: alpha superhelices
X: Repetitive alpha hairpins
H: ARM repeat
T: ARM repeat
F: CNOT1_CAF1_bind

UID:	000979219
Type:	Automatic domain
Parent:	e4gmlA1
Range:	E:1089-1317
PDB:	4gmj
PDB Description:	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1
UniProt:	A5YKK6
Hsap BLAST neighbor:	A5YKK6
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4gmjE1

Domains in the same chain:

Download Pymol

e4gmjE1	E:1089-1317	Repetitive alpha hairpins	ARM repeat	ARM repeat

Domains in the same PDB:

e4gmjA1	A:1089-1317	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4gmjB1	B:10-280	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4gmjC2	C:1093-1317	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4gmjD1	D:1-264	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4gmjE1	E:1089-1317	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4gmjF1	F:1-264	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e4gmjE1 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4gmjF1	E:X,Y,Z->F:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e4gmjD1	E:-X-1,Y-1/2,-Z->D:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e4gmjD1	E:X,Y,Z->D:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e4gmjC2	E:X-1,Y,Z->C:x,y,z	ARM repeat	Interaction Interface Pymol