Domain ID e4gmkA3

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NagB/RpiA/CoA transferase-like
  • F: Rib_5-P_isom_A
UID: 001190017
Type: Automatic domain
Parent: e1o8bA2
Range: A:1-129,A:205-227
Ligands: PO4
PDB: 4gmk
PDB Description: Ribose-5-phosphate isomerase A
UniProt: Q1WR87
Hsap BLAST neighbor: P49247
Species:

Structure of domain e4gmkA3

Structural contacts of domain e4gmkA3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gmkB4 A:X,Y,Z->B:x,y,z D-ribose-5-phosphate isomerase (RpiA), lid domain Interaction Interface Pymol
e4gmkB4 A:X,Y,Z-1->B:x,y,z D-ribose-5-phosphate isomerase (RpiA), lid domain Interaction Interface Pymol
e4gmkB4 A:-X+1,Y,-Z->B:x,y,z D-ribose-5-phosphate isomerase (RpiA), lid domain Interaction Interface Pymol
e4gmkA4 A:x,y,z->A:-X+1/2,Y-1/2,-Z D-ribose-5-phosphate isomerase (RpiA), lid domain Interaction Interface Pymol
e4gmkA3 A:x,y,z->A:-X+1,Y,-Z Rossmann-related Interaction Interface Pymol
e4gmkA3 A:-X+1,Y,-Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e4gmkB3 A:x,y,z->B:-X+1/2,Y-1/2,-Z Rossmann-related Interaction Interface Pymol