Domain ID e4gmp01

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Rhv
UID: 001005097
Type: Automatic domain
Parent: e2x5iB1
Range: 0:82-318
PDB: 4gmp
PDB Description: capsid protein VP0
UniProt: E5RPG0
Species:

Structure of domain e4gmp01

Structural contacts of domain e4gmp01 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gmp11 0:X,Y,Z->1:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4gmp31 0:X,Y,Z->3:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4gmp31 0:Z,-X,-Y->3:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4gmp01 0:x,y,z->0:Y-1/2,X+1/2,-Z-1/2 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4gmp01 0:Y-1/2,X+1/2,-Z-1/2->0:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4gmp11 0:Y-1/2,X+1/2,-Z-1/2->1:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4gmp31 0:Y-1/2,X+1/2,-Z-1/2->3:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol