Domain ID e4gnkD5

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  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: PI-PLC-Y,PI-PLC-X
UID: 001114931
Type: Automatic domain
Parent: e2zkmX4
Range: D:317-470,D:575-712
Ligands: CA
PDB: 4gnk
PDB Description: 1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE BETA-3
UniProt: Q01970
Hsap BLAST neighbor: Q9NQ66
Species: Homo sapiens

Structure of domain e4gnkD5

Domains in the same chain:

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e4gnkD1 D:10-147 PH domain-like PH domain-like PH domain-like
e4gnkD3 D:147-222 EF-hand EF-hand-related EF-hand
e4gnkD4 D:223-316 EF-hand EF-hand-related EF-hand
e4gnkD5 D:317-470,D:575-712 TIM beta/alpha-barrel TIM barrels TIM barrels
e4gnkD2 D:713-881 Immunoglobulin-like beta-sandwich C2 domain C2 domain

Domains in the same PDB:

e4gnkA2 A:18-66,A:187-354 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4gnkA1 A:67-186 Transducin (alpha subunit), insertion domain Transducin (alpha subunit), insertion domain Transducin (alpha subunit), insertion domain
e4gnkB3 B:11-147 PH domain-like PH domain-like PH domain-like
e4gnkB5 B:147-222 EF-hand EF-hand-related EF-hand
e4gnkB4 B:223-316 EF-hand EF-hand-related EF-hand
e4gnkB1 B:317-470,B:573-712 TIM beta/alpha-barrel TIM barrels TIM barrels
e4gnkB2 B:713-881 Immunoglobulin-like beta-sandwich C2 domain C2 domain
e4gnkC5 C:35-66,C:187-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4gnkC6 C:67-186 Transducin (alpha subunit), insertion domain Transducin (alpha subunit), insertion domain Transducin (alpha subunit), insertion domain
e4gnkD1 D:10-147 PH domain-like PH domain-like PH domain-like
e4gnkD3 D:147-222 EF-hand EF-hand-related EF-hand
e4gnkD4 D:223-316 EF-hand EF-hand-related EF-hand
e4gnkD5 D:317-470,D:575-712 TIM beta/alpha-barrel TIM barrels TIM barrels
e4gnkD2 D:713-881 Immunoglobulin-like beta-sandwich C2 domain C2 domain

Structural contacts of domain e4gnkD5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gnkC5 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4gnkB2 D:-X-1/2,-Y,Z-1/2->B:x,y,z C2 domain Interaction Interface Pymol
e4gnkD4 D:X-1,Y,Z->D:x,y,z EF-hand-related Interaction Interface Pymol