ECOD: domain e4gopY2

Domain ID e4gopY2

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: tRNA_anti-codon

UID:	001244138
Type:	Automatic domain
Parent:	e1b8aA1
Range:	Y:46-175
PDB:	4gop
PDB Description:	PUTATIVE UNCHARACTERIZED PROTEIN
UniProt:	Q4PBD4
Hsap BLAST neighbor:	P15927
Species:

Domains in the same chain:

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e4gopY2	Y:46-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e4gopA1	A:1-112	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopB1	B:46-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopC2	C:182-296	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopC3	C:297-431	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopC1	C:441-623	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopX1	X:1-108	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopY2	Y:46-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopZ3	Z:182-296	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopZ2	Z:297-431	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopZ1	Z:441-487,Z:521-623	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4gopZ4	Z:488-520	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e4gopY2 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4gopX1	Y:x,y,z->X:X,Y,Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e4gopZ1	Y:X,Y,Z->Z:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e4gopZ3	Y:x,y,z->Z:-X-1/2,Y-1/2,-Z-1	Nucleic acid-binding proteins	Interaction Interface Pymol
e4gopC2	Y:X,Y,Z->C:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol