Domain ID e4gpeA5

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_N
UID: 001247076
Type: Automatic domain
Parent: e1pvdA2
Range: A:2-181
Ligands: CA GOL NA
PDB: 4gpe
PDB Description: Benzoylformate decarboxylase
UniProt: P20906
Species: Pseudomonas putida

Structure of domain e4gpeA5

Structural contacts of domain e4gpeA5 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gpeA4 A:x,y,z->A:-X-1,-Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4gpeA6 A:x,y,z->A:-X-1,-Y,Z Rossmann-related Interaction Interface Pymol
e4gpeA5 A:x,y,z->A:-X-1,-Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4gpeA5 A:-X-1,-Y,Z->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4gpeA6 A:-X-1,-Y,Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e4gpeA4 A:-X-1,-Y,Z->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4gpeA6 A:x,y,z->A:-X-1,Y,-Z Rossmann-related Interaction Interface Pymol
e4gpeA6 A:-X-1,Y,-Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e4gpeA5 A:x,y,z->A:X,-Y,-Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4gpeA5 A:X,-Y,-Z->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4gpeA4 A:x,y,z->A:X-1/2,-Y-1/2,-Z+1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol