ECOD: domain e4gskB3

Domain ID e4gskB3

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: Activating enzymes of the ubiquitin-like proteins
F: ThiF

UID:	001308019
Type:	Automatic domain
Parent:	e3vh2A3
Range:	B:281-607
Ligands:	ZN
PDB:	4gsk
PDB Description:	Ubiquitin-like modifier-activating enzyme ATG7
UniProt:	P38862
Hsap BLAST neighbor:	O95352
Species:

Domain
In chain context
In PDB context

Structure of domain e4gskB3

Domains in the same chain:

Download Pymol

e4gskB1	B:2-143,B:253-280	Atg7 N-terminal domain-like	N-terminal domain in E1 enzyme Atg7	N-terminal domain in E1 enzyme Atg7
e4gskB2	B:144-252	Atg7 N-terminal domain-like	N-terminal domain in E1 enzyme Atg7	N-terminal domain in E1 enzyme Atg7
e4gskB3	B:281-607	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins

Domains in the same PDB:

e4gskA1	A:3-143,A:253-280	Atg7 N-terminal domain-like	N-terminal domain in E1 enzyme Atg7	N-terminal domain in E1 enzyme Atg7
e4gskA2	A:144-252	Atg7 N-terminal domain-like	N-terminal domain in E1 enzyme Atg7	N-terminal domain in E1 enzyme Atg7
e4gskA3	A:281-605	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins
e4gskB1	B:2-143,B:253-280	Atg7 N-terminal domain-like	N-terminal domain in E1 enzyme Atg7	N-terminal domain in E1 enzyme Atg7
e4gskB2	B:144-252	Atg7 N-terminal domain-like	N-terminal domain in E1 enzyme Atg7	N-terminal domain in E1 enzyme Atg7
e4gskB3	B:281-607	Rossmann-like	Rossmann-related	Activating enzymes of the ubiquitin-like proteins
e4gskY1	Y:1-165	Type III secretory system chaperone-like	Type III secretory system chaperone	Type III secretory system chaperone
e4gskZ1	Z:2-164	Type III secretory system chaperone-like	Type III secretory system chaperone	Type III secretory system chaperone

Structural contacts of domain e4gskB3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4gskA3	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e4gskY1	B:X,Y,Z->Y:x,y,z	Type III secretory system chaperone	Interaction Interface Pymol
e4gskA3	B:X-1/2,-Y+1/2,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e4gskZ1	B:X,Y,Z->Z:x,y,z	Type III secretory system chaperone	Interaction Interface Pymol
e4gskA3	B:x,y,z->A:-X,-Y,Z	Rossmann-related	Interaction Interface Pymol