Domain ID e4h13B1

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  • A: alpha bundles
  • X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • F: Cytochrom_B_C
UID: 000987639
Type: Automatic domain
Parent: e1ppjC1
Range: B:1-160
Ligands: 7PH BCR CLA HEM OPC SQD TDS UMQ
PDB: 4h13
PDB Description: CYTOCHROME B6-F COMPLEX SUBUNIT 4
UniProt: P83792
Hsap BLAST neighbor: P00156
Species: Mastigocladus laminosus

Structure of domain e4h13B1

Domains in the same chain:

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e4h13B1 B:1-160 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e4h13A1 A:1-215 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e4h13B1 B:1-160 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4h13C1 C:1-169,C:232-250 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4h13C3 C:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4h13C2 C:251-288 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
e4h13D2 D:9-47 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e4h13D7 D:48-106,D:148-179 ISP domain ISP domain ISP domain
e4h13D6 D:107-147 Trm112p-like Trm112p-like Trm112p-like
e4h13E1 E:1-32 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex
e4h13F1 F:1-31 PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex
e4h13G1 G:1-37 PetG subunit of the cytochrome b6f complex PetG subunit of the cytochrome b6f complex PetG subunit of the cytochrome b6f complex
e4h13H1 H:1-29 PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex

Structural contacts of domain e4h13B1 of H-group "a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4h13A1 B:x,y,z->A:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e4h13C2 B:X,Y,Z->C:x,y,z Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Interaction Interface Pymol
e4h13C1 B:X,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4h13G1 B:X,Y,Z->G:x,y,z PetG subunit of the cytochrome b6f complex Interaction Interface Pymol
e4h13D6 B:X,X-Y+1,-Z+1/6->D:x,y,z Trm112p-like Interaction Interface Pymol
e4h13D7 B:X,X-Y+1,-Z+1/6->D:x,y,z ISP domain Interaction Interface Pymol
e4h13C1 B:X-Y,-Y+1,-Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4h13H1 B:X,Y,Z->H:x,y,z PetN subunit of the cytochrome b6f complex Interaction Interface Pymol
e4h13D2 B:X,Y,Z->D:x,y,z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol
e4h13A1 B:x,y,z->A:X,X-Y+1,-Z+1/6 Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e4h13F1 B:X,Y,Z->F:x,y,z PetM subunit of the cytochrome b6f complex Interaction Interface Pymol