ECOD: domain e4h1lA2

Domain ID e4h1lA2

A: a+b two layers
X: MHC antigen-recognition domain
H: MHC antigen-recognition domain
T: MHC antigen-recognition domain
F: MHC_II_alpha

UID:	000153865
Type:	Automatic domain
Parent:	e1hdmA2
Range:	A:3-79
PDB:	4h1l
PDB Description:	HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN
UniProt:	P01903
Hsap BLAST neighbor:	P01903
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4h1lA2	A:3-79	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4h1lA1	A:80-180	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4h1lA2	A:3-79	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4h1lA1	A:80-180	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lB2	B:4-87	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4h1lB1	B:95-190	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lD8	D:3-81	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4h1lD7	D:82-180	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lE3	E:4-87	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4h1lE2	E:95-190	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lG1	G:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lH1	H:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lI1	I:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4h1lJ1	J:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4h1lA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1hdmA2	A:X,Y,Z->B:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e4h1lB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4h1lJ1	A:X,Y,Z->J:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4h1lJ1	A:-Y,X-Y+1,Z->J:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4h1lG1	A:-X,-Y+1,Z-1/2->G:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4h1lH1	A:-X,-Y+1,Z-1/2->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol