Domain ID e4hdgA4

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: Flavi_NS5_thumb
UID: 001174690
Type: Automatic domain
Parent: e4c11B1
Range: A:686-889
Ligands: GTP ZN
PDB: 4hdg
PDB Description: POLYPROTEIN
UniProt: P27395
Species: Japanese encephalitis virus

Structure of domain e4hdgA4

Structural contacts of domain e4hdgA4 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4hdgB3 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4hdgB4 A:X,Y,Z->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4hdgB3 A:x,y,z->B:-X-1/2,Y-1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4hdgA3 A:-X-1/2,Y-1/2,-Z-1->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol