ECOD: domain e4hdoA6

Domain ID e4hdoA6

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: Unmapped domains

UID:	001210341
Type:	Automatic domain
Parent:	e5d68A2
Range:	A:417-514
Ligands:	GOL
PDB:	4hdo
PDB Description:	KREV INTERACTION TRAPPED PROTEIN 1
UniProt:	O00522
Hsap BLAST neighbor:	O00522
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4hdoA6

Domains in the same chain:

Download Pymol

e4hdoA6	A:417-514	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4hdoA4	A:515-633	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e4hdoA5	A:634-730	PH domain-like	PH domain-like	PH domain-like

Domains in the same PDB:

e4hdoA6	A:417-514	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4hdoA4	A:515-633	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e4hdoA5	A:634-730	PH domain-like	PH domain-like	PH domain-like
e4hdoB1	B:1-167	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4hdoA6 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4hdoB1	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4hdoA5	A:x,y,z->A:-X+2,Y-1/2,-Z	PH domain-like	Interaction Interface Pymol
e4hdoB1	A:-X+1,Y-1/2,-Z+1->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4hdoB1	A:X-1,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol