ECOD: domain e4hea61

Domain ID e4hea61

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: CheY-like
F: Oxidored_q6

UID:	000234611
Type:	Automatic domain
Parent:	e1ublS3
Range:	6:16-181
Ligands:	SF4
PDB:	4hea
PDB Description:	NADH-QUINONE OXIDOREDUCTASE SUBUNIT 6
UniProt:	Q56218
Hsap BLAST neighbor:	O75251
Species:

Domains in the same chain:

Download Pymol

e4hea61	6:16-181	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like

Domains in the same PDB:

e4hea13	1:2-249	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like
e4hea12	1:250-333	beta-Grasp	Ubiquitin-related	Nqo1 middle domain-like
e4hea11	1:334-438	Bromodomain-like	Nqo1C-terminal domain-like	Nqo1C-terminal domain-like
e4hea22	2:3-74	NQO2 helical bundle domain	NQO2 helical bundle domain	NQO2 helical bundle domain
e4hea21	2:75-180	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e4hea34	3:1-95	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4hea39	3:96-161	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin
e4hea37	3:162-246	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4hea310	3:247-304	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e4hea36	3:305-379,3:542-685	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e4hea35	3:375-541	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e4hea38	3:686-777	cradle loop barrel	RIFT-related	double psi
e4hea42	4:26-63,4:373-409	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4hea43	4:64-106,4:300-372	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4hea41	4:107-299	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit
e4hea51	5:1-196	Nqo5-like	Nqo5-like	Nqo5-like
e4hea61	6:16-181	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e4hea71	7:3-129	Type III secretory system chaperone-like	Frataxin-like	Frataxin-like
e4hea91	9:26-181	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4heaA1	A:1-117	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A
e4heaB3	B:1-248	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like
e4heaB2	B:249-332	beta-Grasp	Ubiquitin-related	Nqo1 middle domain-like
e4heaB1	B:333-437	Bromodomain-like	Nqo1C-terminal domain-like	Nqo1C-terminal domain-like
e4heaC2	C:3-74	NQO2 helical bundle domain	NQO2 helical bundle domain	NQO2 helical bundle domain
e4heaC1	C:75-180	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e4heaD15	D:1-95	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4heaD14	D:96-161	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin
e4heaD12	D:162-246	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4heaD7	D:247-304	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e4heaD6	D:305-379,D:542-685	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e4heaD5	D:375-541	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e4heaD13	D:686-777	cradle loop barrel	RIFT-related	double psi
e4heaE5	E:26-64,E:374-409	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4heaE4	E:65-107,E:301-373	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4heaE6	E:108-300	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit
e4heaF1	F:1-196	Nqo5-like	Nqo5-like	Nqo5-like
e4heaG2	G:16-181	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e4heaH1	H:2-354	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit 8 (Nqo8)-related
e4heaI1	I:1-127	Type III secretory system chaperone-like	Frataxin-like	Frataxin-like
e4heaJ1	J:1-160	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J
e4heaK1	K:1-95	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K
e4heaL1	L:1-605	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e4heaM1	M:1-467	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e4heaN1	N:1-427	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e4heaO1	O:25-180	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4heaP1	P:1-117	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A
e4heaQ1	Q:1-353	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit 8 (Nqo8)-related
e4heaR1	R:1-160	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J
e4heaS1	S:1-95	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K
e4heaT1	T:1-605	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e4heaU1	U:1-467	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e4heaV1	V:1-427	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e4heaW1	W:1-127	TTHA1528-like	TTHA1528-like	TTHA1528-like
e4heaX1	X:1-127	TTHA1528-like	TTHA1528-like	TTHA1528-like

Structural contacts of domain e4hea61 of H-group "Class I glutamine amidotransferase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4hea91	6:X,Y,Z->9:x,y,z	4Fe-4S ferredoxin	Interaction Interface Pymol
e4hea41	6:x,y,z->4:X,Y,Z	alpha-helical domain in nickel-iron hydrogenase, large subunit	Interaction Interface Pymol
e4hea42	6:x,y,z->4:X,Y,Z	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Interaction Interface Pymol
e4hea43	6:x,y,z->4:X,Y,Z	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Interaction Interface Pymol
e4heaH1	6:X,Y,Z->H:x,y,z	Sodium/proton antiporter subunits-like	Interaction Interface Pymol
e4heaA1	6:X,Y,Z->A:x,y,z	NADH-quinone oxidoreductase subunit A	Interaction Interface Pymol
e4heaW1	6:X,Y,Z->W:x,y,z	TTHA1528-like	Interaction Interface Pymol
e4hea51	6:x,y,z->5:X,Y,Z	Nqo5-like	Interaction Interface Pymol
e4heaD5	6:x,y,z->D:X,Y,Z	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Interaction Interface Pymol