Domain ID e4hgvD5

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  • A: alpha arrays
  • X: L-aspartase middle domain-like
  • H: L-aspartase middle domain-like
  • T: L-aspartase middle domain-like
  • F: Lyase_1
UID: 001194634
Type: Automatic domain
Parent: e1c3cA1
Range: D:149-403
Ligands: SO4
PDB: 4hgv
PDB Description: FUMARATE HYDRATASE CLASS II
UniProt: Q92PB6
Hsap BLAST neighbor: P07954
Species:

Structure of domain e4hgvD5

Domains in the same chain:

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e4hgvD6 D:13-148 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4hgvD5 D:149-403 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4hgvD4 D:404-472 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e4hgvA5 A:13-148 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4hgvA4 A:149-403 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4hgvA1 A:404-473 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e4hgvB6 B:13-148 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4hgvB5 B:149-403 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4hgvB4 B:404-472 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e4hgvC1 C:13-148 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4hgvC2 C:149-418,C:466-472 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4hgvD6 D:13-148 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4hgvD5 D:149-403 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4hgvD4 D:404-472 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e4hgvD5 of H-group "L-aspartase middle domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4hgvC2 D:x,y,z->C:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e4hgvC1 D:x,y,z->C:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e4hgvA4 D:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e4hgvA5 D:x,y,z->A:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e4hgvB5 D:x,y,z->B:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e4hgvB4 D:x,y,z->B:X,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e4hgvD4 D:X-1/2,-Y+3/2,-Z->D:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol