Domain ID e4hnvD6

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: PreATP-grasp domain
  • F: Biotin_carb_N
UID: 001645681
Type: Automatic domain
Parent: e4qslH5
Range: D:36-150
PDB: 4hnv
PDB Description: Pyruvate carboxylase
UniProt: Q99UY8
Hsap BLAST neighbor: P11498
Species: Staphylococcus aureus

Structure of domain e4hnvD6

Domains in the same chain:

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e4hnvD6 D:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e4hnvD1 D:151-168,D:239-368 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4hnvD7 D:369-489 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e4hnvD4 D:490-521,D:1030-1094 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4hnvD3 D:522-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e4hnvD5 D:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvD2 D:985-1029 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvD8 D:1101-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e4hnvA3 A:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e4hnvA7 A:151-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4hnvA6 A:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e4hnvA4 A:491-518,A:1030-1100 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4hnvA5 A:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e4hnvA1 A:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvA8 A:985-1029 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvA2 A:1101-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4hnvB5 B:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e4hnvB3 B:151-168,B:239-368 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4hnvB4 B:369-382,B:424-489 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e4hnvB1 B:490-521,B:1030-1099 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4hnvB2 B:522-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e4hnvB6 B:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvB7 B:985-1029 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvB8 B:1100-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4hnvC16 C:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e4hnvC13 C:151-369 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4hnvC15 C:370-490 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e4hnvC17 C:491-518,C:1026-1093,C:1140-1147 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4hnvC12 C:519-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e4hnvC14 C:863-1025 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvD6 D:36-150 Rossmann-like Rossmann-related PreATP-grasp domain
e4hnvD1 D:151-168,D:239-368 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4hnvD7 D:369-489 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e4hnvD4 D:490-521,D:1030-1094 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4hnvD3 D:522-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e4hnvD5 D:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvD2 D:985-1029 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4hnvD8 D:1101-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Structural contacts of domain e4hnvD6 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4hnvB1 D:x,y,z->B:X,Y,Z Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Interaction Interface Pymol
e4hnvB4 D:x,y,z->B:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e4hnvA5 D:X,Y,Z-1->A:x,y,z TIM barrels Interaction Interface Pymol