Domain ID e4htgA3

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Porphobil_deam
UID: 001520889
Type: Automatic domain
Parent: e1pdaA3
Range: A:114-210
Ligands: 18W ACT
PDB: 4htg
PDB Description: PORPHOBILINOGEN DEAMINASE, CHLOROPLASTIC
UniProt: Q43316
Hsap BLAST neighbor: P08397
Species: Arabidopsis thaliana

Structure of domain e4htgA3

Structural contacts of domain e4htgA3 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4htgA1 A:x,y,z->A:-X,Y,-Z+1 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Interaction Interface Pymol
e4htgA3 A:x,y,z->A:-X,Y,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4htgA3 A:-X,Y,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4htgA1 A:-X,Y,-Z+1->A:x,y,z Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Interaction Interface Pymol
e4htgA2 A:x,y,z->A:-X-1/2,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4htgA2 A:-X-1/2,Y-1/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4htgA2 A:X,Y-1,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4htgA1 A:X,Y-1,Z->A:x,y,z Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Interaction Interface Pymol