ECOD: domain e4hvcB5

Domain ID e4hvcB5

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	001150427
Type:	Automatic domain
Parent:	e1kmmA2
Range:	B:1292-1419
PDB:	4hvc
PDB Description:	Bifunctional glutamate/proline--tRNA ligase
UniProt:	P07814
Hsap BLAST neighbor:	P07814
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4hvcB5

Domains in the same chain:

Download Pymol

e4hvcB4	B:1015-1291	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4hvcB5	B:1292-1419	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4hvcB6	B:1420-1512	IF3-like	C-terminal domain of ProRS	C-terminal domain of ProRS

Domains in the same PDB:

e4hvcA10	A:1016-1291	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4hvcA11	A:1292-1419	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4hvcA12	A:1420-1512	IF3-like	C-terminal domain of ProRS	C-terminal domain of ProRS
e4hvcB4	B:1015-1291	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4hvcB5	B:1292-1419	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4hvcB6	B:1420-1512	IF3-like	C-terminal domain of ProRS	C-terminal domain of ProRS

Structural contacts of domain e4hvcB5 of H-group "Anticodon-binding domain of Class II aaRS":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4hvcA10	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4hvcA10	B:x,y,z->A:-X,Y-1/2,-Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol