ECOD: domain e4hykA6

Domain ID e4hykA6

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: HHH_5

UID:	001256193
Type:	Automatic domain
Parent:	e1szpA1
Range:	A:179-241
PDB:	4hyk
PDB Description:	DNA polymerase IV
UniProt:	Q4JB80
Species:

Domain
In chain context
In PDB context

Structure of domain e4hykA6

Domains in the same chain:

Download Pymol

e4hykA5	A:1-21,A:77-178	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e4hykA7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e4hykA6	A:179-241	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4hykA2	A:242-343	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4hykA5	A:1-21,A:77-178	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e4hykA7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e4hykA6	A:179-241	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4hykA2	A:242-343	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4hykA6 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4hykA5	A:x,y,z->A:-Y+1/2,X-1/2,Z+1/4	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e4hykA6	A:x,y,z->A:Y,X,-Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e4hykA6	A:Y,X,-Z->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol