ECOD: domain e4i0pB1

Domain ID e4i0pB1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: C1-set

UID:	000984181
Type:	Automatic domain
Parent:	e1k5nB1
Range:	B:92-188
PDB:	4i0p
PDB Description:	HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DM BETA CHAIN
UniProt:	P28068
Hsap BLAST neighbor:	P28068
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4i0pB2	B:3-93	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pB1	B:92-188	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4i0pA2	A:13-99	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pA1	A:100-200	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pB2	B:3-93	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pB1	B:92-188	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pC2	C:2-82	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pC1	C:83-181	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pD2	D:4-86	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pD1	D:89-191	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pE2	E:13-85	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pE1	E:86-200	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pF2	F:3-93	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pF1	F:92-193	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pG2	G:2-82	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pG1	G:83-181	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4i0pH2	H:4-86	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e4i0pH1	H:89-192	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4i0pB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4i0pA2	B:x,y,z->A:X,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e4i0pA1	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e4i0pF1	B:X-1,Y,Z-1->F:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4i0pD1	B:X,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4i0pG2	B:-X-1,Y-1/2,-Z-1->G:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e4i0pG2	B:-X-1,Y-1/2,-Z-1->H:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol