Domain ID e4i1oE1

Download files:
  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Ras
UID: 000970626
Type: Automatic domain
Parent: e1mh1A1
Range: E:0-159
Ligands: BEF GDP MG
PDB: 4i1o
PDB Description: RAS-RELATED PROTEIN RAB-1B
UniProt: Q9H0U4
Hsap BLAST neighbor: Q9H0U4
Species: Homo sapiens

Structure of domain e4i1oE1

Domains in the same chain:

Download Pymol

e4i1oE1 E:0-159 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4i1oA1 A:4-180 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4i1oB2 B:328-529 LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain
e4i1oB3 B:530-618 LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain
e4i1oC1 C:0-159 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4i1oD2 D:327-529 LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain
e4i1oD3 D:530-618 LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain
e4i1oE1 E:0-159 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4i1oF2 F:327-529 LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain
e4i1oF3 F:530-618 LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain
e4i1oG1 G:0-159 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4i1oH2 H:327-529 LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain LepB GAP domain N-terminal subdomain
e4i1oH3 H:530-618 LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain LepB GAP domain C-terminal subdomain

Structural contacts of domain e4i1oE1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4i1oF3 E:X,Y,Z->F:x,y,z LepB GAP domain C-terminal subdomain Interaction Interface Pymol
e4i1oF2 E:X,Y,Z->F:x,y,z LepB GAP domain N-terminal subdomain Interaction Interface Pymol
e4i1oB2 E:x,y,z->B:-Y-1,X-Y-2,Z+1/3 LepB GAP domain N-terminal subdomain Interaction Interface Pymol