ECOD: domain e4i4tB4

Domain ID e4i4tB4

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: Tubulin nucleotide-binding domain-like
F: Tubulin

UID:	001254372
Type:	Automatic domain
Parent:	e2btoA2
Range:	B:1-245
Ligands:	CA GDP GOL MES MG TYR
PDB:	4i4t
PDB Description:	Tubulin beta-2B chain
UniProt:	Q6B856
Hsap BLAST neighbor:	Q9BVA1
Species:	Bos taurus

Domains in the same chain:

Download Pymol

e4i4tB4	B:1-245	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4i4tB3	B:246-438	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like

Domains in the same PDB:

e4i4tA4	A:1-244	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4i4tA3	A:245-450	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4i4tB4	B:1-245	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4i4tB3	B:246-438	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4i4tC4	C:1-244	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4i4tC3	C:245-440	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4i4tD2	D:1-245	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4i4tD1	D:246-441	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4i4tE2	E:6-143	Stathmin	Stathmin	Stathmin
e4i4tF3	F:1-102,F:125-384	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp

Structural contacts of domain e4i4tB4 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4i4tA4	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e4i4tA3	B:x,y,z->A:X,Y,Z	Tubulin C-terminal domain-like	Interaction Interface Pymol
e4i4tC3	B:x,y,z->C:X,Y,Z	Tubulin C-terminal domain-like	Interaction Interface Pymol
e4i4tC4	B:x,y,z->C:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e4i4tE2	B:X,Y,Z->E:x,y,z	Stathmin	Interaction Interface Pymol
e4i4tC3	B:X-1/2,-Y+1/2,-Z->C:x,y,z	Tubulin C-terminal domain-like	Interaction Interface Pymol
e4i4tE2	B:x,y,z->E:-X+1/2,-Y+1,Z-1/2	Stathmin	Interaction Interface Pymol
e4i4tF3	B:x,y,z->F:-X+1/2,-Y+1,Z-1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol